jml
6430ff0fd6
fix(aphoria): move claims.toml to project root and fix verify integration
...
## Root Cause
Claims file was in applications/aphoria/.aphoria/ but all commands looked
for .aphoria/claims.toml relative to project root. Additionally, .aphoria/
was fully gitignored, preventing version control of claims.
## Changes
### Path Fixes
- Move claims.toml from applications/aphoria/.aphoria/ to .aphoria/ at project root
- Update .gitignore: .aphoria/ → .aphoria/* with !.aphoria/claims.toml exception
- Now claims can be version controlled while keys remain secret
### Verify Integration (Scanner)
- scanner.rs: Load claims from ClaimsFile and call verify_claims()
- ScanResult: Add verify field with VerifyReport
- Report formatters: Add claim verification sections showing PASS/CONFLICT/MISSING
### Clippy Fix
- report/json.rs: Replace filter().map().expect() with filter_map()
## Verification
- aphoria scan . → Shows claim verification with verdicts
- aphoria verify run → Per-claim verification results
- aphoria verify map → Extractor coverage mapping (7/10 claims = 70%)
- aphoria claims list → Reads from project root
- aphoria claims create → Writes to project root
- All tests pass (1120+ aphoria tests)
- clippy --workspace passes
## Impact
Both primary use cases now work:
1. Day-to-day (commit-time): Skills can read/create claims via CLI
2. Audit (scan-time): Scanner verifies code against authored claims
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2026-02-08 11:09:57 +00:00
jml
3b5f88b4f0
feat(aphoria): implement claims architecture (A1-A5) with verify engine, corpus, coverage, and explain
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Complete Aphoria claims system overhaul:
- A1: Rename ExtractedClaim to Observation (extractors produce observations, not claims)
- A2: Add AuthoredClaim with full provenance, invariants, and authority tiers
- A3: Verify engine comparing observations against authored claims, CLI + formatters
- A4: Corpus as first-class assertions with predicate indexing, authority lens, trust packs
- A5: Coverage analysis, explain/docs generation, self-audit extractor, claim suggester skill
Also includes: 42 extractors updated for Observation type, verifiable_predicates trait,
conflict detection with comparison modes, claims TOML persistence, Grafana dashboard,
backup/restore scripts, and comprehensive test coverage.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-08 09:11:47 +00:00
jordan
3320c24afa
feat: WAL hardening (Phase 5B) - CRC32C, crash recovery, group commit, log rotation
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Add CRC32C checksums to WAL record format (v2), implement crash recovery
with automatic truncation of corrupt records, add feature-gated group commit
buffer for batched fsync under concurrent load, and implement log rotation
via segment files with global offset addressing.
Key changes:
- Record format v2: [len:u32][crc32c:u32][blake3:32][payload:N]
- recover_file() scans and truncates corrupt tail records
- GroupCommitBuffer batches fsync via MPSC channel (tokio feature gate)
- SegmentManager with binary search resolution and cursor-based cleanup
- Journal::read() auto-refreshes segments on miss for writer/reader split
- Split recovery.rs and key_codec.rs into directory modules for 500-line max
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-02 12:36:35 -07:00
jordan
1ce4004807
feat: Complete Phase 2 (The Cortex) - query, lens, and API layers
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This commit adds the read path (Cortex) to complement the write path (Spine):
## Crates
- stemedb-api: HTTP API with axum + utoipa OpenAPI
- /v1/assert, /v1/query, /v1/epoch, /v1/skeptic, /v1/trace, /v1/audit
- Metered endpoints with quota enforcement
- Ed25519 signature verification
- stemedb-lens: Truth resolution lenses
- RecencyLens, ConsensusLens, ConfidenceLens
- VoteAwareConsensusLens (Ballot Box pattern)
- TrustAwareAuthorityLens (The Hive pattern)
- SkepticLens (conflict analysis)
- EpochAwareLens (paradigm-safe queries)
- stemedb-query: Query engine with materialized views
## Storage Extensions
- VoteStore: Vote aggregation with cached counts
- TrustRankStore: Agent reputation with decay
- AuditStore: Query audit trail
- IndexStore: SP/P/S index structures
- SupersessionStore: Epoch supersession chains
## SDKs
- sdk/go/steme: Go HTTP client with Ed25519 signing
- sdk/go/adk: ADK-Go tools for AI agents
## Documentation
- Updated CLAUDE.md, architecture.md, roadmap.md
- New ai-lookup entries for all services
- Use case docs for consumer health intelligence
- Arena roadmap for simulation advancement
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-01 13:22:44 -07:00
