Commit Graph

7 Commits

Author SHA1 Message Date
jordan
d3a88585fe feat: Phase 6 UAT - Admission control, HLC recency, cluster coordination
This commit includes comprehensive work on Phase 6 features:

## Admission Control (Phase 6 admission middleware)
- AdmissionStore implementation backed by TrustRankStore
- PoW verification with tier-based difficulty computation
- Trust tier progression (Newcomer → Established → Trusted → Authority)
- API integration with admission status endpoints

## HLC Recency Lens (Phase 6C)
- HlcRecencyLens for distributed system ordering
- Hybrid logical clock integration with causality preservation

## Cluster Coordination (Phase 6C)
- Multi-node cluster tests (availability, partition tolerance)
- CRDT convergence tests for anti-entropy sync
- Gateway handler improvements

## Aphoria Code Linter (Phase 2A)
- RFC/OWASP corpus builders with network fetching and caching
- Concept hierarchy with auto-alias creation on conflict detection
- Multiple security extractors (TLS, JWT, CORS, secrets, rate limiting)

## Code Organization
- Split large files into modules to comply with 500-line limit
- Improved test organization with separate test modules
- Fixed rkyv serialization for EigenTrustState (AgentScore struct)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-03 00:43:37 -07:00
jordan
afed95fe26 feat: Multi-node cluster coordination (Phase 6C)
Add stemedb-cluster crate implementing horizontal scaling:

- SWIM-based membership protocol for node discovery and failure detection
- Consistent hashing (jump hash) for subject-to-shard routing
- Range management with dynamic split (>64MB) and merge (<20MB) operations
- Stateless HTTP gateway for client request routing via axum
- Meta-range gossip merge for cluster-wide metadata propagation

Includes restrictive CORS policy, proper error propagation from routing,
replica cache invalidation on node failure, and 84 tests (57 unit + 27
integration). Raft MV coordination deferred per design decision.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-02 20:57:54 -07:00
jordan
55349845d0 refactor: Split all files to enforce 500-line max
Break monolith source files into focused modules:
- stemedb-core/types.rs → types/ directory (assertion, source, gold_standard, etc.)
- stemedb-storage: audit_store, quota_store, trust_rank_store, vector_index, vote_store → module directories
- stemedb-ingest/worker.rs → worker/ with separate test modules
- stemedb-query: engine, materializer, query → module directories
- stemedb-lens: epoch_aware, skeptic → module directories
- stemedb-sim/lib.rs → agent, arenas/, helpers, runner, strategy, types
- stemedb-api/tests: integration_tests → http_basic, http_validation, http_epoch, http_pipeline
- stemedb-api/tests: e2e_flow_test → e2e_full_pipeline, e2e_lens_resolution
- stemedb-query/tests: e2e_pipeline → e2e_pipeline + e2e_decay

Also adds new features: gold standard verification, escalation handlers,
admin endpoints, concept hierarchy spec, arena roadmap, and Go SDK.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-02 01:13:45 -07:00
jordan
c59066949a feat: Add quickstart "Beyond Hello World" sections with Skeptic and Layered endpoints
- Add Layered() method to Go SDK for per-source-class consensus queries
- Add LayeredQueryParams, LayeredResult, TierResolution types to Go SDK
- Create conflict example demonstrating Skeptic and Layered endpoints
- Update quickstart.md with sections 6 (conflict detection) and 7 (authority tiers)
- Remove tracked Go binary and add data/ to .gitignore

The new quickstart sections demonstrate Episteme's differentiating features:
- Skeptic endpoint shows "Trust but Verify" conflict analysis
- Layered endpoint shows per-tier resolution (Clinical vs Anecdotal)

Note: Pre-existing large files flagged by pre-commit hook (technical debt from prior sessions)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-01 21:00:59 -07:00
jordan
1ce4004807 feat: Complete Phase 2 (The Cortex) - query, lens, and API layers
This commit adds the read path (Cortex) to complement the write path (Spine):

## Crates
- stemedb-api: HTTP API with axum + utoipa OpenAPI
  - /v1/assert, /v1/query, /v1/epoch, /v1/skeptic, /v1/trace, /v1/audit
  - Metered endpoints with quota enforcement
  - Ed25519 signature verification
- stemedb-lens: Truth resolution lenses
  - RecencyLens, ConsensusLens, ConfidenceLens
  - VoteAwareConsensusLens (Ballot Box pattern)
  - TrustAwareAuthorityLens (The Hive pattern)
  - SkepticLens (conflict analysis)
  - EpochAwareLens (paradigm-safe queries)
- stemedb-query: Query engine with materialized views

## Storage Extensions
- VoteStore: Vote aggregation with cached counts
- TrustRankStore: Agent reputation with decay
- AuditStore: Query audit trail
- IndexStore: SP/P/S index structures
- SupersessionStore: Epoch supersession chains

## SDKs
- sdk/go/steme: Go HTTP client with Ed25519 signing
- sdk/go/adk: ADK-Go tools for AI agents

## Documentation
- Updated CLAUDE.md, architecture.md, roadmap.md
- New ai-lookup entries for all services
- Use case docs for consumer health intelligence
- Arena roadmap for simulation advancement

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-01 13:22:44 -07:00
jordan
3cfaa1e1d3 feat: Complete Phase 1 (The Spine) - storage foundation
Phase 1 delivers the complete durability and storage layer:

- WAL with crash recovery: Append-only journal with BLAKE3 checksums,
  fsync guarantees, and proper seek-to-EOF on reopen
- Storage engine: sled-backed KVStore with scan_prefix for range queries
- Content-addressed storage: H:{hash}, V:{hash}, E:{hash} key patterns
- Ingestor: Background worker tailing WAL, writing to KV with 8-byte
  aligned record headers for rkyv zero-copy deserialization
- Comprehensive tests: 31 tests covering crash recovery, round-trips,
  and multi-cycle durability

New crates: stemedb-wal, stemedb-storage, stemedb-ingest

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-31 14:15:34 -07:00
jordan
a776744889 Initial project setup with Claude Code monorepo structure
- Rust workspace with stemedb-core crate
- Full .claude/ configuration (agents, skills, commands, guides)
- ai-lookup/ for token-efficient fact storage
- Quality gates: clippy, fmt, jscpd duplication detection
- Pre-commit hook with 5-phase quality checks
- CLAUDE.md router and CODING_GUIDELINES.md standards

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-31 10:56:26 -07:00