stemedb/demo/keys/agents.json
jordan 157dbbb9eb feat: Complete Aphoria Phase 8-9 + UAT suite (90/90 tests passing)
## Phase 8: Enterprise Extractor Improvements 
- 14 security extractors (TLS, JWT, SQL injection, XSS, etc.)
- 10 framework-specific extractors (Spring, Django, Rails, etc.)
- Config file security detection (YAML, TOML)

## Phase 9: Autonomous Extractor Generation 
- Shadow mode executor with TP/FP tracking
- Graduation pipeline with confidence thresholds
- Auto-rollback on regression detection
- Cross-project pattern syncing

## UAT Suite Complete (14 scripts, 90 tests)
- test-core-detection.sh (6 tests)
- test-declarative-extractors.sh (5 tests)
- test-domain-frameworks.sh (5 tests)
- test-domain-unreal.sh (3 tests)
- test-llm-extraction.sh (6 tests)
- test-eval-harness.sh (5 tests)
- test-cross-language.sh (3 tests)
- test-precommit-performance.sh (4 tests)
- test-output-formats.sh (8 tests)
- test-drift-detection.sh (6 tests)
- test-exit-codes.sh (12 tests)
+ 3 more scripts

## Other Changes
- Updated roadmap to mark Phase 8-9 complete
- Added .gitignore entries for build artifacts
- Updated pre-commit: 800 line limit, exclude tests/data/cmd

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-06 22:50:55 -07:00

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{
"clinicaltrials:study-importer": {
"seed": "e1bd24e230ebe9d5470e9187780b80b9631b2ae6a90a2197b616b2a834a47da7",
"public_key": "aa6f11e80dd787498528eccc00ab46b3d19c3d8d5c30417498fff14b0302bac5",
"tier": 1,
"description": "Imports trial protocols and results from ClinicalTrials.gov",
"sources": "ClinicalTrials.gov"
},
"fda:drug-label-ingestor": {
"seed": "06f1ee48c822a6ff8721e0a54e4349b833f78320767034871e385c6a535aeeb5",
"public_key": "31cf051e3d7c9cae93277a2f0cb2dd1d09b7a0a7167b8782a49b4ac57c6fa7b3",
"tier": 0,
"description": "Ingests FDA drug label data from DailyMed and FDA Orange Book",
"sources": "DailyMed, FDA Orange Book"
},
"internal:clinical-ops-reviewer": {
"seed": "bacce10b13d1efb1f3bb9c26913cd723f53387d40811f277c8f1d748c84fc58f",
"public_key": "7f781705c56047037db522c47691c3fc4b38e77a7d7f654ca644155a59993e59",
"tier": 3,
"description": "Internal clinical expert providing manual review and annotations",
"sources": "Internal review, Manual annotations"
},
"pubmed:abstract-indexer": {
"seed": "9de7b198d68eb0ac7a2be28bbf60762a1d41d76c308a1f7a15e723be86aea106",
"public_key": "83b7c1e6394cc46b1cad352a49bfcceab78dd592a1cebfa03800a9af99fd6d52",
"tier": 1,
"description": "Indexes clinical trial abstracts from PubMed/MEDLINE",
"sources": "PubMed, MEDLINE"
},
"reddit:health-discussion-scraper": {
"seed": "ef4cb452380bacdf32695c9ec6c6bbf7f81dddf4a0c1a4fbf4f985eb0d9d93b4",
"public_key": "29cb285fdcdac0eb623812b63bde48b7be98d1ac07c14d7d402abdc1ec031402",
"tier": 5,
"description": "Scrapes patient experience reports from health communities",
"sources": "Reddit r/loseit, r/Ozempic, health forums"
}
}