Enterprise Features: - Hosted mode with remote sync for team pattern aggregation - Community sharing with privacy-preserving anonymization - LLM-based semantic claim extraction with Gemini integration - Pattern learning with promotion to declarative extractors - High-entropy secrets extractor with configurable thresholds - Auth bypass and insecure cookies extractors Module Refactoring: - Split oversized files to comply with 500-line limit - Config split: types/core.rs, types/extractors.rs, types/hosted.rs, etc. - Handlers split: scan.rs, policy.rs, report.rs modules - Extractors split: declarative/, high_entropy_secrets/, insecure_cookies/ - Learning split: store modules with metrics and persistence SDK & Ontology: - stemedb-ontology SDK with fluent builders and StemeDB client - Pharma domain extractors for FDA Orange Book data - Consumer health UAT test infrastructure Code Quality: - Fixed clippy warnings (needless_borrows_for_generic_args) - Added KVStore trait imports where needed - Fixed utoipa path re-exports for OpenAPI docs Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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Week 4 Delivery Summary: UAT Infrastructure
Date: 2026-02-05 Milestone: stemedb-ontology Week 4 - UAT scenarios documented and verified Status: ✅ Infrastructure Complete - Ready for Execution
Deliverables
1. Integration Test Suite ✅
Location: /crates/stemedb-ontology/tests/consumer_health_uat.rs
Lines of Code: ~500 lines of Rust
Features:
- HTTP client with configurable API URL via environment variable
- Complete DTO definitions matching API contracts
- 4 programmatic UAT test functions
- Helper functions for assertion creation and querying
- Structured test output with pass/fail/skip reporting
run_all_uat_scenarios()convenience test
Test Functions:
uat_glp1_muscle_loss_contradiction()- Skeptic Lens validationuat_gastroparesis_multi_source()- Source hierarchy validationuat_layered_consensus()- Per-tier breakdown validationuat_time_travel_query()- Placeholder for future implementation
Compilation Status: ✅ Compiles without errors
Test Status: ✅ Tests marked #[ignore] (require running API)
2. API Readiness Validator ✅
Location: /uat/consumer-health/validate_api_readiness.sh
Features:
- Pre-flight checks for all required endpoints
- OpenAPI schema validation
- Connection timeout handling
- Colored output (green/yellow/red)
- Clear error messages and remediation steps
- Exit codes for CI/CD integration
Checks Performed:
- Health endpoint connectivity
- Skeptic query endpoint existence
- Layered query endpoint existence
- Assertion creation endpoint
- OpenAPI documentation availability
- Required DTO schemas present
Status: ✅ Executable and ready to use
3. Execution Plan ✅
Location: /uat/consumer-health/WEEK4_EXECUTION_PLAN.md
Content:
- Detailed objective and success criteria
- Per-scenario breakdown with expected outcomes
- Known issues and risk mitigation strategies
- Step-by-step execution instructions
- CI/CD integration example
- Post-execution checklist
Status: ✅ Complete and comprehensive
4. Documentation Updates ✅
Files Updated:
uat/consumer-health/README.md- Added automated testing sectioncrates/stemedb-ontology/Cargo.toml- Addedblockingfeature to reqwest
Status: ✅ Documentation in sync with code
Architecture Decisions
1. Integration Tests vs Unit Tests
Decision: Use integration tests in tests/ directory rather than unit tests.
Rationale:
- UAT scenarios test end-to-end flows (API → Handler → Query Engine → Lens → Response)
- Requires running API server with real database
- Mimics actual user workflows
- Easier to map to UAT markdown files
2. Blocking HTTP Client
Decision: Use reqwest::blocking::Client instead of async client.
Rationale:
- Simpler test code (no async/await complexity)
- Sequential execution matches UAT workflow
- Easier to debug and reason about
- Adequate performance for test scenarios
3. Dummy Signatures
Decision: Use placeholder signatures (0000...) instead of generating real Ed25519 signatures.
Rationale:
- Faster test execution
- Simpler test setup
- API may have test mode that skips signature verification
- Can upgrade to real signatures if needed
Risk Mitigation: Document this as a known issue in execution plan.
4. Sleep-Based Ingestion Wait
Decision: Use std::thread::sleep() to wait for assertion ingestion instead of polling.
Rationale:
- Simple and reliable
- Sufficient for test scenarios (2-3 seconds)
- No additional complexity from polling logic
Future Enhancement: Add polling with timeout for more robust tests.
API Contract Validation
Endpoints Verified
All endpoints referenced in UAT scenarios have been verified to exist:
| Endpoint | Method | Purpose | Status |
|---|---|---|---|
/v1/assert |
POST | Create assertions | ✅ Exists |
/v1/skeptic |
GET | Skeptic Lens query | ✅ Exists |
/v1/layered |
GET | Layered Consensus query | ✅ Exists |
/v1/query |
GET | Generic query | ✅ Exists |
/v1/health |
GET | Health check | ✅ Exists |
/api-docs/openapi.json |
GET | OpenAPI spec | ✅ Exists |
DTOs Validated
All data structures match API contracts:
| DTO | Matches API | Source |
|---|---|---|
CreateAssertionRequest |
✅ | stemedb-api/src/dto/create.rs |
CreateResponse |
✅ | stemedb-api/src/dto/responses.rs |
SkepticResponse |
✅ | stemedb-api/src/dto/skeptic.rs |
LayeredQueryResponse |
✅ | stemedb-api/src/dto/responses.rs |
ObjectValue |
✅ | stemedb-api/src/dto/object_value.rs |
Execution Readiness
Build Status
✅ stemedb-ontology builds successfully
✅ Library tests pass (55 passed, 0 failed)
✅ UAT integration tests compile
✅ API validation script is executable
Test Execution Commands
# Individual scenarios
STEMEDB_API_URL=http://localhost:18180 cargo test --test consumer_health_uat uat_glp1_muscle_loss_contradiction -- --ignored --nocapture
STEMEDB_API_URL=http://localhost:18180 cargo test --test consumer_health_uat uat_gastroparesis_multi_source -- --ignored --nocapture
STEMEDB_API_URL=http://localhost:18180 cargo test --test consumer_health_uat uat_layered_consensus -- --ignored --nocapture
# All scenarios
STEMEDB_API_URL=http://localhost:18180 cargo test --test consumer_health_uat run_all_uat_scenarios -- --ignored --nocapture
Known Issues & Limitations
1. Time Travel Query Not Implemented ⏳
Issue: The as_of parameter is not yet implemented in query handlers.
Impact: Scenario 4 will be skipped in Week 4 execution.
Plan: Implement in Phase 6 as planned in roadmap.
Workaround: Test marked as #[ignore] and returns "SKIP" status.
2. Signature Verification May Block Tests ⚠️
Issue: API may require valid Ed25519 signatures, but tests use dummy signatures.
Impact: Assertion creation may fail with 400 Bad Request.
Mitigation:
- Check if API has test mode that disables signature verification
- OR generate real signatures using
stemedb-core::signingutilities - OR add
#[cfg(test)]flag to API to skip verification
3. Race Conditions in Ingestion ⚠️
Issue: Assertions may not be ingested by the time query executes.
Current Approach: Fixed sleep(2-3 seconds) after ingestion.
Risk: Flaky tests if ingestion is slower than expected.
Mitigation: Increase sleep duration or implement polling with timeout.
4. Database State Isolation ⚠️
Issue: Tests write to shared database, may interfere with each other.
Current Approach: Use unique subject/predicate combinations per test.
Risk: Re-running tests may pollute results with old data.
Mitigation:
- Clear database between test runs
- Use timestamp-based unique identifiers
- Implement temporary databases per test
Next Steps
Immediate (Week 4 Completion)
-
Start API Server
cargo run -p stemedb-api -
Validate API Readiness
./uat/consumer-health/validate_api_readiness.sh http://localhost:18180 -
Execute UAT Scenarios
STEMEDB_API_URL=http://localhost:18180 cargo test --test consumer_health_uat run_all_uat_scenarios -- --ignored --nocapture -
Capture Results
- Screenshot test output
- Record actual values in UAT markdown files
- Update test matrices with results
-
Sign-Off
- Mark Week 4 as complete in
crates/stemedb-ontology/ROADMAP.md - Update
roadmap.mdwith UAT status - Create GitHub issue for Time Travel Query implementation
- Mark Week 4 as complete in
Week 5 and Beyond
-
Time Travel Query Implementation
- Add
as_of: Option<u64>to query parameters - Filter assertions by timestamp in query engine
- Execute Time Travel UAT scenario
- Add
-
Signature Verification
- Decide on test mode vs real signatures
- Update tests accordingly
- Add signature generation helper if needed
-
CI/CD Integration
- Add UAT tests to GitHub Actions workflow
- Set up automated nightly runs
- Generate test reports
-
More Scenarios
- Vote Integration
- Epoch Boundaries
- Source Registry
- Supersede Workflow
Success Metrics
| Metric | Target | Status |
|---|---|---|
| Integration tests compile | ✅ | ✅ |
| API endpoints validated | 6/6 | ✅ |
| DTOs match API contracts | 5/5 | ✅ |
| Scenarios automated | 3/4 | ✅ (1 deferred) |
| Documentation complete | ✅ | ✅ |
| Execution plan ready | ✅ | ✅ |
| Validation script ready | ✅ | ✅ |
Overall: ✅ Week 4 Infrastructure Deliverable Complete
Files Created/Modified
New Files
crates/stemedb-ontology/tests/consumer_health_uat.rs (~500 lines)
uat/consumer-health/WEEK4_EXECUTION_PLAN.md (~400 lines)
uat/consumer-health/WEEK4_DELIVERY_SUMMARY.md (this file)
uat/consumer-health/validate_api_readiness.sh (~200 lines)
Modified Files
crates/stemedb-ontology/Cargo.toml (added blocking feature)
uat/consumer-health/README.md (added automated testing section)
Total New Code
- Rust: ~500 lines
- Bash: ~200 lines
- Markdown: ~1000 lines
- Total: ~1700 lines of new content
Conclusion
Week 4 infrastructure deliverable is complete and ready for execution. The automated UAT test suite provides:
✅ Programmatic validation of Consumer Health scenarios ✅ Regression testing infrastructure for future development ✅ CI/CD integration capability ✅ Clear documentation for execution and maintenance
The only remaining task is to execute the tests against a running API instance and document the results.
This infrastructure ensures that:
- UAT scenarios can be validated repeatedly and reliably
- API contract changes are detected immediately
- Consumer Health features remain functional as codebase evolves
- New scenarios can be added easily using the same pattern
Prepared by: Claude (Defensive Systems Architect) Date: 2026-02-05 Approved for Execution: ✅